Basic Information
Locus ID:
Tel4E01G138600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 79631248 | 79632354 | + | Tel4E01G138600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 39,504.07 Da | 39.53 | 68.45 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 164 | 210 | 1.7E-10 | IPR006652 |
| Pfam | PF00646 | F-box domain | 20 | 54 | 8.2E-5 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 93 | 355 | 1.31E-46 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 58 | 9.55E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 286 | 362 | 3.0E-5 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 36 | 285 | 4.9E-38 | IPR015915 |
| SMART | SM00612 | kelc_smart | 226 | 275 | 12.0 | IPR006652 |
| SMART | SM00612 | kelc_smart | 176 | 225 | 9.8E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 127 | 175 | 2.2E-4 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_044368579.1 | F-box/kelch-repeat protein At2g44130-like [Triticum aestivum] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6ILD6 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology