Basic Information
Locus ID:
Tel4E01G085600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 41843301 | 41847541 | - | Tel4E01G085600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 30,917.46 Da | 40.42 | 81.41 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 7 | 66 | 2.4E-5 | IPR000504 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 3 | 81 | 2.58E-11 | IPR035979 |
| Gene3D | G3DSA:3.30.70.330 | - | 1 | 73 | 5.2E-9 | IPR012677 |
| SMART | SM00360 | rrm1_1 | 5 | 74 | 1.9E-4 | IPR000504 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 4 | 78 | 10.172579 | IPR000504 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G17720.1 | RNA-binding (RRM/RBD/RNP motifs) family protein. | 0 |
| RefSeq | XP_037429005.1 | binding partner of ACD11 1-like [Triticum dicoccoides] | 0 |
| Q9LFD5 | Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6INV7 | RRM domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology