HalophFGD

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Basic Information
Locus ID: Tel4E01G067500
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 29877484 29878437 - Tel4E01G067500
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.45 36,014.78 Da 44.39 82.40 -0.32
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 30 217 4.0E-12 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051221085.1 F-box/LRR-repeat protein At2g43260-like [Lolium perenne] 0
TrEMBL A0A3B6IME2 DUF295 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 2 AsparagusV1_04.129.V1.1, AsparagusV1_04.132.V1.1
Poaceae Echinochloa crus-galli 12 AH01.2284, AH01.2287, AH02.3093, BH01.2576, BH01.2577 ...
BH01.2600, BH01.2606, BH06.2373, BH06.2374, BH08.484, CH01.2781, CH01.2785
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.2HG0112950.1.CDS1 ...
HORVU.MOREX.r3.5HG0509830.1.CDS1, HORVU.MOREX.r3.5HG0509860.1.CDS1, HORVU.MOREX.r3.6HG0540080.1.CDS1, HORVU.MOREX.r3.6HG0631840.1.CDS1
Poaceae Lolium multiflorum 23 gene-QYE76_000501, gene-QYE76_002124, gene-QYE76_005967 ...
gene-QYE76_014992, gene-QYE76_018899, gene-QYE76_023242, gene-QYE76_023243, gene-QYE76_025428, gene-QYE76_025429, gene-QYE76_035401, gene-QYE76_047095, gene-QYE76_056057, gene-QYE76_058287, gene-QYE76_061402, gene-QYE76_063367, gene-QYE76_063958, gene-QYE76_065546, gene-QYE76_067195, gene-QYE76_068002, gene-QYE76_068005, gene-QYE76_071518, gene-QYE76_071649, gene-QYE76_071650
Poaceae Oryza coarctata 2 Oco09G017100, Oco09G017160
Poaceae Oryza sativa 1 LOC_Os05g49450.1
Poaceae Paspalum vaginatum 1 gene-BS78_01G236300
Poaceae Puccinellia tenuiflora 14 Pt_Chr0100309, Pt_Chr0100311, Pt_Chr0100312, Pt_Chr0100314 ...
Pt_Chr0100315, Pt_Chr0100317, Pt_Chr0100318, Pt_Chr0100321, Pt_Chr0100542, Pt_Chr0102698, Pt_Chr0200532, Pt_Chr0504632, Pt_Chr0600920, Pt_Chr0700610
Poaceae Thinopyrum elongatum 6 Tel2E01G288800, Tel3E01G766900, Tel4E01G067300 ...
Tel4E01G067500, Tel4E01G600200, Tel5E01G590100
Poaceae Triticum aestivum 16 TraesCS2A02G142000.1, TraesCS2A02G551700.1.cds1 ...
TraesCS2A02G567200.1.cds1, TraesCS2B02G167200.1.cds1, TraesCS2D02G127900.1.cds1, TraesCS3B02G520900.1, TraesCS3D02G472500.1.cds1, TraesCS4B02G034200.1.cds1, TraesCS5B02G387400.1.cds1, TraesCS5D02G379400.1.cds1, TraesCS6B02G000800.1.cds1, TraesCS6B02G009900.1.cds1, TraesCS6B02G042700.1.cds1, TraesCS6B02G042800.1.cds1, TraesCS6D02G006100.1.cds1, TraesCS6D02G034300.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.