Basic Information
Locus ID:
Tel4E01G058500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 25288296 | 25291572 | + | Tel4E01G058500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 63,166.42 Da | 39.23 | 80.25 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 400 | 459 | 1.15749E-17 | IPR002048 |
| CDD | cd00051 | EFh | 471 | 533 | 1.05872E-15 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 92 | 351 | 9.49531E-122 | - |
| Pfam | PF00069 | Protein kinase domain | 93 | 352 | 3.1E-68 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 398 | 460 | 5.3E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 470 | 533 | 1.0E-11 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 89 | 359 | 1.62E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 380 | 559 | 1.27E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 362 | 536 | 2.0E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 95 | 179 | 2.4E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 180 | 361 | 8.2E-60 | - |
| SMART | SM00220 | serkin_6 | 93 | 352 | 1.1E-92 | IPR000719 |
| SMART | SM00054 | efh_1 | 471 | 499 | 0.008 | IPR002048 |
| SMART | SM00054 | efh_1 | 399 | 427 | 2.1E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 507 | 535 | 6.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 435 | 463 | 0.013 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 93 | 352 | 47.367992 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 431 | 466 | 10.859108 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 395 | 430 | 15.433954 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 467 | 502 | 12.449146 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 503 | 538 | 12.839682 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 480 | 492 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 408 | 420 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 99 | 123 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 444 | 456 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 516 | 528 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 71 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_037422422.1 | calcium-dependent protein kinase 9-like [Triticum dicoccoides] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I184 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology