Basic Information
Locus ID:
Tel4E01G014000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6847276 | 6851554 | + | Tel4E01G014000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 77,888.12 Da | 62.41 | 64.30 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 638 | 678 | 9.71538E-22 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 636 | 683 | 6.0E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 638 | 684 | 7.85E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 619 | 690 | 3.0E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 639 | 678 | 10.807436 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044373004.1 | uncharacterized protein LOC123095566 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6JD47 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology