Basic Information
Locus ID:
Tel3E01G897700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 665795823 | 665798047 | + | Tel3E01G897700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 39,027.04 Da | 32.04 | 87.24 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 14 | 185 | 1.33896E-55 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 212 | 366 | 3.19379E-73 | - |
| Pfam | PF00190 | Cupin | 210 | 352 | 1.4E-20 | IPR006045 |
| Pfam | PF00190 | Cupin | 17 | 168 | 3.5E-22 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 10 | 358 | 9.87E-46 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 18 | 191 | 2.5E-27 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 209 | 369 | 5.9E-47 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 13 | 171 | 1.6E-27 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 209 | 353 | 1.3E-13 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 225 | 245 | 1.1E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 272 | 288 | 1.1E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 308 | 326 | 1.1E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 330 | 347 | 1.1E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 290 | 305 | 1.1E-12 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_037418743.1 | 11S globulin seed storage protein 2-like [Triticum dicoccoides] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | M8BD39 | 11S globulin seed storage protein 2 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology