Basic Information
Locus ID:
Tel3E01G897100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Calmodulin binding protein-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 665595567 | 665600802 | - | Tel3E01G897100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 56,345.26 Da | 59.99 | 70.06 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07887 | Calmodulin binding protein-like | 144 | 299 | 2.2E-23 | IPR012416 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 301 | - | - |
| Coils | Coil | Coil | 99 | 119 | - | - |
| Coils | Coil | Coil | 59 | 86 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G25800.1 | Calmodulin-binding protein. | 0 |
| RefSeq | XP_044346536.1 | uncharacterized protein LOC123068115 [Triticum aestivum] | 0 |
| Q0WVV6 | Calmodulin-binding protein 60 D OS=Arabidopsis thaliana OX=3702 GN=CBP60D PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6FZ17 | C2H2-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.2165, CH04.2588, CH06.2103 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0306700.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_058377, gene-QYE76_058984, gene-QYE76_058985 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G255700, gene-BS78_05G255800 |
| Poaceae | Thinopyrum elongatum | 7 | Tel3E01G641200, Tel3E01G641300, Tel3E01G896700 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3BG086480, gene_TRIDC3BG086490 |
| Poaceae | Triticum aestivum | 5 | TraesCS3A02G403500.1, TraesCS3B02G600600.1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-45984, nbis-gene-45985 |