HalophFGD

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Basic Information
Locus ID: Tel3E01G896800
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Calmodulin binding protein-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 665491427 665493874 - Tel3E01G896800
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.50 31,914.33 Da 42.01 76.55 -0.81
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07887 Calmodulin binding protein-like 102 249 2.7E-20 IPR012416
MobiDBLite mobidb-lite consensus disorder prediction 236 281 - -
MobiDBLite mobidb-lite consensus disorder prediction 264 281 - -
Coils Coil Coil 32 80 - -
Gene Ontology
Molecular Function:
GO:0005516 (calmodulin binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037417114.1 uncharacterized protein LOC119280332 [Triticum dicoccoides] 0
TrEMBL A0A3B6FZ17 C2H2-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH04.2165, CH04.2588, CH06.2103
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0306700.1
Poaceae Lolium multiflorum 3 gene-QYE76_058377, gene-QYE76_058984, gene-QYE76_058985
Poaceae Paspalum vaginatum 2 gene-BS78_05G255700, gene-BS78_05G255800
Poaceae Thinopyrum elongatum 7 Tel3E01G641200, Tel3E01G641300, Tel3E01G896700 ...
Tel3E01G896800, Tel3E01G897000, Tel3E01G897100, Tel7E01G132400
Poaceae Triticum dicoccoides 2 gene_TRIDC3BG086480, gene_TRIDC3BG086490
Poaceae Triticum aestivum 5 TraesCS3A02G403500.1, TraesCS3B02G600600.1 ...
TraesCS3B02G600700.1, TraesCS3B02G600800.4, TraesCS3D02G536000.1
Poaceae Zoysia japonica 2 nbis-gene-45984, nbis-gene-45985
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.