Basic Information
Locus ID:
Tel3E01G887600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 661470202 | 661472409 | - | Tel3E01G887600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 41,204.67 Da | 30.22 | 92.49 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 14 | 184 | 6.06604E-56 | - |
| Pfam | PF00190 | Cupin | 209 | 326 | 4.0E-14 | IPR006045 |
| Pfam | PF00190 | Cupin | 17 | 167 | 4.1E-22 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 11 | 320 | 1.22E-40 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 18 | 190 | 8.9E-28 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 208 | 355 | 3.0E-33 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 208 | 341 | 7.6E-5 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 13 | 170 | 2.8E-29 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 307 | 325 | 2.3E-7 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 224 | 244 | 2.3E-7 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 271 | 287 | 2.3E-7 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 289 | 304 | 2.3E-7 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_044338102.1 | 11S globulin seed storage protein 2-like [Triticum aestivum] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ER75 | 11S seed storage protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology