Basic Information
Locus ID:
Tel3E01G887300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 661392136 | 661411709 | + | Tel3E01G887300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 105,832.59 Da | 47.97 | 92.11 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18052 | Rx N-terminal domain | 452 | 530 | 3.7E-15 | IPR041118 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 270 | 373 | 1.5E-14 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 40 | 254 | 1.7E-46 | IPR000719 |
| SUPERFAMILY | SSF49354 | PapD-like | 255 | 393 | 2.01E-21 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 25 | 260 | 5.66E-62 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 518 | 801 | 9.86E-28 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 267 | 390 | 1.4E-26 | IPR013783 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 609 | 800 | 5.4E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 19 | 266 | 8.5E-60 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 451 | 539 | 9.8E-20 | - |
| SMART | SM00220 | serkin_6 | 39 | 318 | 1.4E-28 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 268 | 388 | 18.580973 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 350 | 32.781708 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 45 | 67 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 904 | 934 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 911 | 934 | - | - |
| Coils | Coil | Coil | 464 | 484 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38830.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044441364.1 | disease resistance protein RGA5-like [Triticum aestivum] | 0 |
| Q9T0J1 | Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9UIH8 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401763 |
| Poaceae | Thinopyrum elongatum | 3 | Tel3E01G887300, Tel7E01G003400, Tel7E01G032900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2BG011520, gene_TRIDC6AG000550 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2B02G100300.1, TraesCS4A02G476000.1 ... |