Basic Information
Locus ID:
Tel3E01G879600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
TFIIS helical bundle-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 657342838 | 657353219 | + | Tel3E01G879600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 71,962.85 Da | 44.41 | 87.82 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00183 | TFIIS_I | 193 | 269 | 4.66247E-17 | - |
| Pfam | PF08711 | TFIIS helical bundle-like domain | 219 | 268 | 9.4E-13 | IPR017923 |
| Pfam | PF00069 | Protein kinase domain | 384 | 635 | 1.6E-42 | IPR000719 |
| SUPERFAMILY | SSF47676 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 173 | 278 | 1.83E-20 | IPR035441 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 368 | 637 | 1.16E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 366 | 643 | 2.2E-64 | - |
| Gene3D | G3DSA:1.20.930.10 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 134 | 272 | 5.5E-25 | IPR035441 |
| SMART | SM00220 | serkin_6 | 381 | 643 | 2.5E-37 | IPR000719 |
| SMART | SM00509 | TFS2_5 | 191 | 270 | 2.5E-16 | IPR003617 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 381 | 642 | 32.513161 | IPR000719 |
| ProSiteProfiles | PS51319 | TFIIS N-terminal domain profile. | 185 | 271 | 21.232023 | IPR017923 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 387 | 409 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 512 | 524 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 295 | - | - |
| Coils | Coil | Coil | 347 | 367 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G48050.1 | BAH domain ;TFIIS helical bundle-like domain. | 0 |
| RefSeq | XP_045089928.1 | interleukin-1 receptor-associated kinase 4 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9SYS3 | Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana OX=3702 GN=CRK40 PE=2 SV=1 | 0 | |
| TrEMBL | M8B1W5 | Putative cysteine-rich receptor-like protein kinase 39 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology