Basic Information
Locus ID:
Tel3E01G831800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 633283732 | 633286519 | - | Tel3E01G831800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.41 | 36,291.89 Da | 51.52 | 77.93 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 169 | 241 | 1.6E-19 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 104 | 163 | 4.9E-13 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 251 | 319 | 2.7E-23 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 247 | 321 | 4.6E-24 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 85 | 164 | 1.24E-17 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 164 | 242 | 2.48E-21 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 96 | 164 | 1.4E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 246 | 324 | 1.3E-30 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 165 | 245 | 3.1E-28 | - |
| SMART | SM00213 | ubq_7 | 167 | 240 | 4.5E-17 | IPR000626 |
| SMART | SM00213 | ubq_7 | 249 | 320 | 1.7E-21 | IPR000626 |
| SMART | SM00213 | ubq_7 | 102 | 166 | 4.1E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 249 | 319 | 20.827379 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 167 | 240 | 18.192556 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 102 | 163 | 13.423744 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 280 | 300 | 1.3E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 301 | 322 | 1.3E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 259 | 279 | 1.3E-23 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_044354254.1 | polyubiquitin-like isoform X2 [Triticum aestivum] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6H3I0 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G831800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG082370 |
| Poaceae | Triticum aestivum | 2 | TraesCS3B02G569700.1, TraesCS3D02G511900.1 |