Basic Information
Locus ID:
Tel3E01G784700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 608746052 | 608746633 | + | Tel3E01G784700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.85 | 21,037.92 Da | 40.88 | 91.81 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 1 | 154 | 9.33024E-45 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 1 | 164 | 2.0E-36 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 1 | 157 | 1.45E-36 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 165 | 1.1E-36 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59270.2 | - | 0 |
| RefSeq | XP_044354688.1 | L-type lectin-domain containing receptor kinase IX.1-like [Triticum aestivum] | 0 |
| Q39529 | Agglutinin-2 OS=Cladrastis kentukea OX=38412 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6H2J9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH03.1787, CH03.1958 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0100870.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G156100, gene-BS78_05G241600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0107997 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G012180 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G102500, Tel3E01G784700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG004410, gene_TRIDC2AG004420 |
| Poaceae | Triticum aestivum | 11 | TraesCS2B02G054500.1, TraesCS2D02G040700.1 ... |