HalophFGD

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Basic Information
Locus ID: Tel3E01G736000
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 579184784 579185989 + Tel3E01G736000
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.12 44,575.89 Da 57.13 97.31 0.11
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 22 88 1.08E-9 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037408194.1 uncharacterized protein LOC119270301 [Triticum dicoccoides] 0
TrEMBL A0A077S7V5 F-box domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF152700010CFD_c1 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 16 AH02.1784, AH07.1452, AH07.1901, AH07.1934, BH07.1147 ...
BH07.1413, BH07.1435, BH07.1908, BH08.1369, CH07.1033, CH07.1126, CH07.1132, CH07.1145, CH07.1151, CH07.927, CH08.1785
Poaceae Eleusine coracana subsp. coracana 27 gene-QOZ80_2AG0110190, gene-QOZ80_2AG0110220 ...
gene-QOZ80_2AG0110280, gene-QOZ80_2AG0110360, gene-QOZ80_2AG0110370, gene-QOZ80_2AG0110390, gene-QOZ80_2AG0110400, gene-QOZ80_2AG0110410, gene-QOZ80_2AG0111460, gene-QOZ80_2AG0111470, gene-QOZ80_2AG0112350, gene-QOZ80_2AG0129810, gene-QOZ80_2BG0163700, gene-QOZ80_2BG0163770, gene-QOZ80_2BG0163790, gene-QOZ80_2BG0163830, gene-QOZ80_2BG0163840, gene-QOZ80_2BG0163850, gene-QOZ80_2BG0163860, gene-QOZ80_2BG0163870, gene-QOZ80_2BG0164930, gene-QOZ80_2BG0164940, gene-QOZ80_2BG0165720, gene-QOZ80_2BG0184810, gene-QOZ80_4AG0320630, gene-QOZ80_6AG0508590, gene-QOZ80_6AG0508610
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.3HG0314570.1.CDS1 ...
HORVU.MOREX.r3.3HG0314590.1.CDS1, HORVU.MOREX.r3.3HG0314720.1.CDS1, HORVU.MOREX.r3.3HG0314740.1.CDS1
Poaceae Lolium multiflorum 7 gene-QYE76_015261, gene-QYE76_015310, gene-QYE76_017079 ...
gene-QYE76_041523, gene-QYE76_057756, gene-QYE76_057833, gene-QYE76_057908
Poaceae Oryza coarctata 5 Oco03G007930, Oco03G008160, Oco04G008280, Oco04G008290 ...
Oco07G002840
Poaceae Oryza sativa 5 LOC_Os02g18630.1, LOC_Os02g18640.1, LOC_Os02g19200.1 ...
LOC_Os04g24820.1, LOC_Os04g25840.1
Poaceae Puccinellia tenuiflora 2 Pt_Chr0505900, Pt_Chr0600724
Poaceae Sporobolus alterniflorus 5 Chr06G031530, Chr06G031540, Chr0G015730, Chr13G012900 ...
Chr14G001690
Poaceae Thinopyrum elongatum 6 Tel1E01G687800, Tel3E01G732700, Tel3E01G733300 ...
Tel3E01G735300, Tel3E01G735800, Tel3E01G736000
Poaceae Triticum dicoccoides 6 gene_TRIDC3AG065160, gene_TRIDC3AG065250 ...
gene_TRIDC3BG073870, gene_TRIDC3BG074090, gene_TRIDC3BG074110, gene_TRIDC3BG074120
Poaceae Triticum aestivum 21 TraesCS1A02G415600.1, TraesCS3A02G461700.1 ...
TraesCS3A02G461800.1, TraesCS3A02G462700.1, TraesCS3A02G463100.1.cds1, TraesCS3B02G504300.1, TraesCS3B02G504400.1.cds1, TraesCS3B02G504600.1.cds1, TraesCS3B02G505600.1.cds1, TraesCS3B02G505900.1.cds1, TraesCS3B02G506100.1.cds1, TraesCS3B02G506300.1.cds1, TraesCS3D02G455100.1, TraesCS3D02G455200.1.cds1, TraesCS3D02G455400.1.cds1, TraesCS3D02G456200.1, TraesCS3D02G456400.1.cds1, TraesCS3D02G456600.1, TraesCS3D02G456800.1.cds1, TraesCS3D02G457000.1.cds1, TraesCS3D02G457100.1
Poaceae Zea mays 1 Zm00001eb240310_P001
Poaceae Zoysia japonica 4 nbis-gene-16342, nbis-gene-34069, nbis-gene-45207 ...
nbis-gene-57917
Poaceae Zoysia macrostachya 4 Zma_g12618, Zma_g15259, Zma_g15303, Zma_g2662
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.