Basic Information
Locus ID:
Tel3E01G717400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 567569429 | 567574824 | - | Tel3E01G717400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 54,043.03 Da | 54.72 | 71.84 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 319 | 347 | 0.27 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 365 | 396 | 0.031 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 127 | 474 | 8.43E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 204 | 474 | 3.0E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 437 | 476 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 312 | 352 | 0.011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 230 | 265 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 355 | 396 | 0.0088 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62770.1 | Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence. | 0 |
| RefSeq | XP_020163033.1 | autophagy-related protein 18a [Aegilops tauschii subsp. strangulata] | 0 |
| Q93VB2 | Autophagy-related protein 18a OS=Arabidopsis thaliana OX=3702 GN=ATG18A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EQJ6 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology