Basic Information
Locus ID:
Tel3E01G683600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 547380946 | 547382245 | - | Tel3E01G683600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 37,387.37 Da | 55.16 | 79.55 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 318 | 353 | 1.7E-7 | IPR002893 |
| SUPERFAMILY | SSF81901 | HCP-like | 116 | 217 | 3.14E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 39 | 94 | 5.76E-8 | IPR036047 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 313 | 354 | 4.36E-10 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 105 | 251 | 9.8E-12 | IPR011990 |
| Gene3D | G3DSA:6.10.140.2220 | - | 307 | 354 | 1.4E-10 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 315 | 353 | 10.496479 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 39 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_020188481.1 | F-box protein At1g67340 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453GCI5 | MYND-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology