Basic Information
Locus ID:
Tel3E01G672900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 541391063 | 541393984 | - | Tel3E01G672900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 11,464.76 Da | 52.46 | 61.43 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 23 | 95 | 1.54389E-47 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 24 | 94 | 4.9E-25 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 99 | 9.1E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 22 | 100 | 1.0E-38 | - |
| SMART | SM00213 | ubq_7 | 24 | 95 | 2.5E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 22 | 99 | 15.514182 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_044351492.1 | small ubiquitin-related modifier 1-like [Triticum aestivum] | 0 |
| P55857 | Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1 | 0 | |
| TrEMBL | W5D2R4 | Small ubiquitin-related modifier OS=Triticum aestivum OX=4565 GN=TRAES_3BF091100240CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology