HalophFGD

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Basic Information
Locus ID: Tel3E01G641300
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Calmodulin binding protein-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 523954499 523956092 + Tel3E01G641300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.83 27,457.59 Da 54.07 84.31 -0.36
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07887 Calmodulin binding protein-like 42 196 1.1E-34 IPR012416
MobiDBLite mobidb-lite consensus disorder prediction 1 35 - -
Gene Ontology
Molecular Function:
GO:0005516 (calmodulin binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G62570.3 - 0
RefSeq XP_037409880.1 uncharacterized protein LOC119272515 [Triticum dicoccoides] 0
Swiss-Prot C0SVV6 Calmodulin-binding protein 60 A OS=Arabidopsis thaliana OX=3702 GN=CBP60A PE=2 SV=1 0
TrEMBL A0A8R7TZ67 Calmodulin_bind domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH04.2165, CH04.2588, CH06.2103
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0306700.1
Poaceae Lolium multiflorum 3 gene-QYE76_058377, gene-QYE76_058984, gene-QYE76_058985
Poaceae Paspalum vaginatum 2 gene-BS78_05G255700, gene-BS78_05G255800
Poaceae Thinopyrum elongatum 7 Tel3E01G641200, Tel3E01G641300, Tel3E01G896700 ...
Tel3E01G896800, Tel3E01G897000, Tel3E01G897100, Tel7E01G132400
Poaceae Triticum dicoccoides 2 gene_TRIDC3BG086480, gene_TRIDC3BG086490
Poaceae Triticum aestivum 5 TraesCS3A02G403500.1, TraesCS3B02G600600.1 ...
TraesCS3B02G600700.1, TraesCS3B02G600800.4, TraesCS3D02G536000.1
Poaceae Zoysia japonica 2 nbis-gene-45984, nbis-gene-45985
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.