Basic Information
Locus ID:
Tel3E01G630900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 518627935 | 518633280 | + | Tel3E01G630900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.70 | 73,225.28 Da | 53.69 | 89.67 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 55 | 93 | 9.2E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 112 | 158 | 6.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 388 | 593 | 1.7E-27 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 240 | 3.63E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 661 | 1.5E-46 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 459 | 4.0E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 260 | 1.7E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 211 | 5.3E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 460 | 684 | 8.8E-39 | - |
| SMART | SM00369 | LRR_typ_2 | 121 | 144 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 216 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 168 | 19.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 663 | 26.746487 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 696 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044358846.1 | probable inactive receptor kinase At2g26730 [Triticum aestivum] | 0 |
| O48788 | Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana OX=3702 GN=At2g26730 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6GZD6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0305640.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G630900 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC3AG056560, gene_TRIDC3BG063430-41216 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G397700.1, TraesCS3B02G429600.1 ... |