Basic Information
Locus ID:
Tel3E01G625800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 516261048 | 516265390 | + | Tel3E01G625800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 46,487.38 Da | 45.42 | 89.24 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00983 | recA | 65 | 395 | 1.97123E-164 | IPR013765 |
| Pfam | PF00154 | recA bacterial DNA recombination protein | 69 | 335 | 1.1E-117 | IPR013765 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 338 | 392 | 4.19E-8 | IPR023400 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 70 | 335 | 7.23E-56 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 96 | 397 | 3.4E-114 | IPR027417 |
| SMART | SM00382 | AAA_5 | 119 | 296 | 1.7E-7 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 66 | 391 | 6.6E-135 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 97 | 258 | 35.812611 | IPR020588 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | 6.0 | - |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 266 | 340 | 28.062979 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 281 | 289 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 229 | 258 | 3.6E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 365 | 382 | 3.6E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 191 | 220 | 3.6E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 278 | 306 | 3.6E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 311 | 340 | 3.6E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 157 | 186 | 3.6E-74 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 66 | 397 | 42.589867 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 433 | - | - |
| Coils | Coil | Coil | 376 | 396 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_020195227.1 | DNA repair protein recA homolog 3, mitochondrial [Aegilops tauschii subsp. strangulata] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6GZU3 | Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology