Basic Information
Locus ID:
Tel3E01G624400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 515590859 | 515591584 | + | Tel3E01G624400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 26,147.33 Da | 80.36 | 44.65 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 5 | 56 | 6.01E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 81 | 134 | 5.44E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 136 | 5.1E-7 | IPR013083 |
| SMART | SM00184 | ring_2 | 8 | 44 | 0.0089 | IPR001841 |
| SMART | SM00184 | ring_2 | 84 | 121 | 0.0028 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 8 | 44 | 10.202563 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 84 | 122 | 8.668251 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 241 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020187079.1 | E3 ubiquitin-protein ligase WAV3-like [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | M8ALU7 | VWFA domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_071424 |
| Poaceae | Puccinellia tenuiflora | 9 | Pt_Chr0100096, Pt_Chr0100209, Pt_Chr0100707, Pt_Chr0100708 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G624400 |