Basic Information
Locus ID:
Tel3E01G612800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 507522192 | 507522659 | - | Tel3E01G612800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 17,156.95 Da | 34.06 | 61.68 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 28 | 151 | 4.36543E-22 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 151 | 4.09E-28 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 28 | 152 | 8.0E-25 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 155 | 17.527157 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040260423.1 | LOW QUALITY PROTEIN: BTB/POZ and MATH domain-containing protein 1 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A077RXR5 | Speckle-type POZ protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF043700240CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH01.1925 |
| Poaceae | Hordeum vulgare | 7 | HORVU.MOREX.r3.1HG0084480.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 17 | gene-QYE76_018116, gene-QYE76_018795, gene-QYE76_018798 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os10g29410.1 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0108068, Pt_Chr0202979, Pt_Chr0203631, Pt_Chr0206738 ... |
| Poaceae | Thinopyrum elongatum | 15 | Tel1E01G617200, Tel1E01G617400, Tel3E01G612800 ... |
| Poaceae | Triticum dicoccoides | 14 | gene_TRIDC1AG055610, gene_TRIDC1AG055620 ... |
| Poaceae | Triticum aestivum | 31 | TraesCS1A02G378700.1.cds1, TraesCS1A02G378800.1.cds1 ... |