Basic Information
Locus ID:
Tel3E01G579400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 484373551 | 484379569 | + | Tel3E01G579400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 160,027.45 Da | 37.83 | 106.62 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 1224 | 1444 | 3.34666E-116 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 285 | 573 | 2.58188E-95 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 907 | 1200 | 4.1331E-88 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 599 | 798 | 2.6131E-109 | - |
| Pfam | PF00005 | ABC transporter | 1243 | 1391 | 3.5E-29 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 617 | 751 | 1.6E-19 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 909 | 1153 | 1.5E-28 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 289 | 545 | 1.1E-21 | IPR011527 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1215 | 1457 | 4.54E-66 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 275 | 581 | 1.96E-29 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 595 | 821 | 9.37E-57 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 907 | 1208 | 8.24E-51 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1211 | 1462 | 3.1E-78 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 871 | 1207 | 3.7E-60 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 262 | 581 | 3.2E-44 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 588 | 832 | 2.4E-75 | IPR027417 |
| SMART | SM00382 | AAA_5 | 1252 | 1437 | 2.9E-11 | IPR003593 |
| SMART | SM00382 | AAA_5 | 626 | 807 | 6.3E-11 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 284 | 565 | 28.405016 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 599 | 822 | 23.196051 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 909 | 1189 | 34.970551 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1226 | 1460 | 17.133656 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 724 | 738 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 860 | 881 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_044358473.1 | ABC transporter C family member 3 isoform X1 [Triticum aestivum] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | Q71CZ3 | Multidrug resistance associated protein MRP2 OS=Triticum aestivum OX=4565 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology