halophFGD

Basic Information

Locus ID: Tel3E01G567000

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description: PB1 domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	474314657	474316067	+	Tel3E01G567000

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.81	12,001.83 Da	59.36	91.36	0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	1	24	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_037444750.1	uncharacterized protein LOC119313039 isoform X2 [Triticum dicoccoides]	0
TrEMBL	A0A3B6LZ26	Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg16243, jg20918, jg24700, jg37769, jg38512, jg5854
Aizoaceae	Mesembryanthemum crystallinum	3	gene_10660, gene_5357, gene_7746
Amaranthaceae	Atriplex hortensis	2	Ah028233, Ah033219
Amaranthaceae	Beta vulgaris	2	BVRB_7g167150, BVRB_8g195050
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg26510, Sbi_jg34054
Amaranthaceae	Salicornia europaea	1	Seu_jg15040
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00007608, GOSA_00011950, GOSA_00019046
Amaranthaceae	Suaeda glauca	6	Sgl64415, Sgl68865, Sgl73791, Sgl77296, Sgl79506, Sgl81974
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000007871, gene:ENSEOMG00000018542 ... gene:ENSEOMG00000023171, gene:ENSEOMG00000037845, gene:ENSEOMG00000040279, gene:ENSEOMG00000048068
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.2AG0010180, CQ.Regalona.r1.2BG0010900 ... CQ.Regalona.r1.3AG0004350, CQ.Regalona.r1.4BG0021650, CQ.Regalona.r1.6BG0017070, CQ.Regalona.r1.7AG0010690, CQ.Regalona.r1.7BG0012840, CQ.Regalona.r1.8AG0020140
Anacardiaceae	Pistacia vera	6	pistato.v30014740, pistato.v30079070, pistato.v30188240 ... pistato.v30188350, pistato.v30240730, pistato.v30255560
Apiaceae	Apium graveolens	7	Ag10G01474, Ag10G02955, Ag2G01385, Ag2G02813, Ag3G02374 ... Ag4G01814, Ag7G00057
Arecaceae	Cocos nucifera	6	COCNU_05G008050, COCNU_06G000330, COCNU_06G008120 ... COCNU_08G011190, COCNU_09G008920, scaffold001198G000040
Arecaceae	Phoenix dactylifera	5	gene-LOC103706982, gene-LOC103716843, gene-LOC103722913 ... gene-LOC103723481, gene-LOC120109084
Asparagaceae	Asparagus officinalis	3	AsparagusV1_06.342.V1.1, AsparagusV1_07.1917.V1.1 ... AsparagusV1_08.2701.V1.1
Asteraceae	Flaveria trinervia	5	Ftri10G29612, Ftri14G16627, Ftri15G04347, Ftri15G08416 ... Ftri3G10048
Brassicaceae	Arabidopsis thaliana	5	AT1G04700.1, AT1G16270.1, AT1G79570.1, AT2G35050.1 ... AT3G24715.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10002378m.g.v1.0, Thhalv10006624m.g.v1.0 ... Thhalv10006649m.g.v1.0, Thhalv10016154m.g.v1.0, Thhalv10018023m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g03540.v2.2, Sp1g14470.v2.2, Sp3g22450.v2.2 ... Sp4g17320.v2.2, Sp5g34630.v2.2
Brassicaceae	Brassica nigra	11	BniB01g009270.2N, BniB01g009280.2N, BniB03g025820.2N ... BniB03g026850.2N, BniB06g008820.2N, BniB06g022290.2N, BniB06g041600.2N, BniB06g046140.2N, BniB06g050970.2N, BniB06g067910.2N, BniB08g022120.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq01G1692, Ceq04G1411, Ceq06G0666, Ceq06G2022, Ceq07G0777
Casuarinaceae	Casuarina glauca	3	Cgl01G1851, Cgl06G0690, Cgl06G2130
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g15900, gene.Cymno05g08900, gene.Cymno13g03480 ... gene.Cymno14g03500
Dunaliellaceae	Dunaliella salina	1	Dusal.0069s00024.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate03g07670, gene.Thate05g20970
Malvaceae	Hibiscus hamabo Siebold & Zucc.	4	nbisL1-mrna-12047, nbisL1-mrna-3077, nbisL1-mrna-4689 ... nbisL1-mrna-4959
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG01.2952, evm.TU.LG04.1521, evm.TU.LG07.994 ... evm.TU.LG11.628, evm.TU.LG12.378
Plantaginaceae	Plantago ovata	4	Pov_00012916, Pov_00015117, Pov_00025126, Pov_00038131
Plumbaginaceae	Limonium bicolor	7	Lb1G05346, Lb2G13939, Lb3G20663, Lb4G22096, Lb4G22097 ... Lb5G27535, Lb5G28686
Poaceae	Echinochloa crus-galli	13	AH03.3697, AH03.40, AH03.957, AH05.3927, BH03.1110, BH03.42 ... BH03.3972, BH05.4009, CH03.1252, CH03.4236, CH03.50, CH05.4212, Contig1882.1
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_5BG0444640, gene-QOZ80_7AG0552300 ... gene-QOZ80_7AG0565000, gene-QOZ80_7BG0583330, gene-QOZ80_UnG0722220
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.5HG0437110.1, HORVU.MOREX.r3.5HG0512370.1 ... HORVU.MOREX.r3.5HG0537810.1
Poaceae	Lolium multiflorum	5	gene-QYE76_000461, gene-QYE76_026135, gene-QYE76_041678 ... gene-QYE76_067398, gene-QYE76_067442
Poaceae	Oryza coarctata	6	Oco05G015460, Oco06G015960, Oco13G006130, Oco14G006740 ... Oco23G009610, Oco24G009340
Poaceae	Oryza sativa	2	LOC_Os03g28300.1, LOC_Os07g25680.1
Poaceae	Paspalum vaginatum	5	gene-BS78_02G003900, gene-BS78_02G088400 ... gene-BS78_02G350500, gene-BS78_08G128700, gene-BS78_08G130400
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0106929, Pt_Chr0106932, Pt_Chr0304034, Pt_Chr0402482 ... Pt_Chr0405893, Pt_Chr0704184, Pt_Chr0704201
Poaceae	Sporobolus alterniflorus	11	Chr04G018290, Chr06G018930, Chr06G018940, Chr0G018450 ... Chr19G008270, Chr19G015000, Chr19G015010, Chr24G006050, Chr27G000210, Chr27G008350, Chr28G005460
Poaceae	Thinopyrum elongatum	5	Tel3E01G567000, Tel5E01G132900, Tel5E01G631500 ... Tel5E01G896600, Tel5E01G896700
Poaceae	Triticum dicoccoides	4	gene_TRIDC5AG057960, gene_TRIDC5BG062070 ... gene_TRIDC5BG083780, gene_TRIDC7BG000310
Poaceae	Triticum aestivum	9	TraesCS5A02G063200.1, TraesCS5A02G398200.1 ... TraesCS5B02G069200.8, TraesCS5B02G403300.1, TraesCS5B02G568400.1, TraesCS5D02G074400.1, TraesCS5D02G407700.1, TraesCS5D02G560600.1, TraesCS7B02G003200.1
Poaceae	Zea mays	3	Zm00001eb030680_P001, Zm00001eb147730_P001 ... Zm00001eb268050_P003
Poaceae	Zoysia japonica	3	nbis-gene-30476, nbis-gene-43199, nbis-gene-52554
Poaceae	Zoysia macrostachya	3	Zma_g26060, Zma_g5054, Zma_g5864
Portulacaceae	Portulaca oleracea	8	evm.TU.LG01.473, evm.TU.LG03.993, evm.TU.LG04.288 ... evm.TU.LG11.1244, evm.TU.LG11.1245, evm.TU.LG12.739, evm.TU.LG16.1477, evm.TU.LG26.188
Posidoniaceae	Posidonia oceanica	4	gene.Posoc03g24940, gene.Posoc06g02610, gene.Posoc08g09420 ... gene.Posoc10g08770
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.Scaffold_10_RagTag.1010, evm.TU.Scaffold_5_RagTag.42 ... evm.TU.Scaffold_3_RagTag.1351, evm.TU.Scaffold_4_RagTag.1511, evm.TU.Scaffold_9_RagTag.1093, evm.TU.Scaffold_9_RagTag.40
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-10436, nbisL1-mrna-1668, nbisL1-mrna-21096 ... nbisL1-mrna-22167, nbisL1-mrna-25251, nbisL1-mrna-26234
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-10870, nbisL1-mrna-19570, nbisL1-mrna-1978 ... nbisL1-mrna-236, nbisL1-mrna-8573
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-18610, nbisL1-mrna-2598, nbisL1-mrna-4339 ... nbisL1-mrna-7648, nbisL1-mrna-9243
Rhizophoraceae	Kandelia candel	6	evm.TU.utg000003l.24, evm.TU.utg000003l.674 ... evm.TU.utg000004l.275, evm.TU.utg000006l.29, evm.TU.utg000008l.819, evm.TU.utg000019l.430
Rhizophoraceae	Kandelia obovata	5	Maker00001086, Maker00004230, Maker00009700, Maker00014088 ... Maker00017732
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-12226, nbisL1-mrna-1388, nbisL1-mrna-2232 ... nbisL1-mrna-3669, nbisL1-mrna-6648, nbisL1-mrna-9317
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-14509, nbisL1-mrna-18148, nbisL1-mrna-21581 ... nbisL1-mrna-4971, nbisL1-mrna-6869, nbisL1-mrna-7695, nbisL1-mrna-9654
Salicaceae	Populus euphratica	8	populus_peu03371, populus_peu04039, populus_peu13961 ... populus_peu23157, populus_peu26587, populus_peu26589, populus_peu34220, populus_peu34878
Solanaceae	Lycium barbarum	4	gene-LOC132606287, gene-LOC132611160, gene-LOC132617083 ... gene-LOC132621926
Solanaceae	Solanum chilense	1	SOLCI004502700
Solanaceae	Solanum pennellii	3	gene-LOC107010896, gene-LOC107010902, gene-LOC107029747
Tamaricaceae	Reaumuria soongarica	2	STRG.27891_chr04_-, gene_7032
Tamaricaceae	Tamarix chinensis	2	TC01G0470, TC02G2859
Zosteraceae	Zostera marina	3	Zosma03g22630.v3.1, Zosma03g27400.v3.1, Zosma04g06580.v3.1