Basic Information
Locus ID:
Tel3E01G467500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 403001633 | 403010312 | - | Tel3E01G467500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 86,311.13 Da | 50.59 | 78.40 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 547 | 579 | 0.0015 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 640 | 672 | 0.032 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 454 | 775 | 2.4E-50 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 233 | 5.61E-14 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 432 | 777 | 6.9E-120 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 23 | 238 | 4.6E-20 | - |
| SMART | SM00320 | WD40_4 | 681 | 720 | 1.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 448 | 486 | 2.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 497 | 536 | 0.39 | IPR001680 |
| SMART | SM00320 | WD40_4 | 736 | 775 | 4.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 539 | 579 | 5.7E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 634 | 672 | 3.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 591 | 630 | 0.35 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 546 | 581 | 9.810144 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 226 | 11.057749 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 641 | 681 | 13.048234 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 503 | 545 | 8.570195 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 641 | 677 | 10.442869 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 546 | 581 | 11.744925 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 523 | 537 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 659 | 673 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 659 | 673 | 2.7E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 566 | 580 | 2.7E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 523 | 537 | 2.7E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 122 | - | - |
| Coils | Coil | Coil | 229 | 259 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53090.1 | SPA1-related 4. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants. | 0 |
| RefSeq | XP_037413995.1 | protein SPA1-RELATED 3-like isoform X1 [Triticum dicoccoides] | 0 |
| Q94BM7 | Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EMF8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology