Basic Information
Locus ID:
Tel3E01G433700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 372907146 | 372907973 | + | Tel3E01G433700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 29,960.42 Da | 71.83 | 56.55 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 227 | 264 | 5.99569E-10 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 226 | 270 | 8.2E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 226 | 271 | 1.13E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 200 | 275 | 6.9E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 227 | 264 | 7.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 227 | 265 | 10.881201 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 172 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_044337137.1 | zinc finger CCCH domain-containing protein 15-like [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6ELK1 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology