Basic Information
Locus ID:
Tel3E01G385500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 326050575 | 326055337 | + | Tel3E01G385500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 88,711.44 Da | 40.00 | 94.39 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 500 | 633 | 1.78449E-21 | - |
| Pfam | PF17862 | AAA+ lid domain | 656 | 699 | 1.3E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 502 | 632 | 9.4E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 462 | 691 | 1.55E-57 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 101 | 383 | 1.0E-4 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 634 | 714 | 5.3E-94 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 461 | 633 | 5.3E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 498 | 635 | 6.5E-19 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 605 | 624 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 742 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 749 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_037413255.1 | peroxisomal biogenesis factor 6-like isoform X1 [Triticum dicoccoides] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | W5D4G5 | AAA domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF055300010CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology