Basic Information
Locus ID:
Tel3E01G373400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 310719183 | 310719941 | + | Tel3E01G373400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 27,477.35 Da | 51.87 | 71.47 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 178 | 240 | 2.50696E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 177 | 239 | 2.5E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 98 | 156 | 1.7E-8 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 90 | 240 | 2.75E-38 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 10 | 170 | 6.4E-18 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 171 | 247 | 7.2E-24 | - |
| SMART | SM00054 | efh_1 | 98 | 126 | 0.029 | IPR002048 |
| SMART | SM00054 | efh_1 | 135 | 163 | 0.25 | IPR002048 |
| SMART | SM00054 | efh_1 | 178 | 206 | 8.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 214 | 242 | 1.5E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 131 | 166 | 10.97069 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 174 | 209 | 14.959732 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 210 | 245 | 13.648647 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 94 | 129 | 12.979158 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 187 | 199 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 144 | 156 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 107 | 119 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 223 | 235 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 45 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_040259873.1 | probable calcium-binding protein CML14 [Aegilops tauschii subsp. strangulata] | 0 |
| Q5ZD81 | Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 GN=CML12 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453F0F2 | Calcium-binding protein CML11 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology