Basic Information
Locus ID:
Tel3E01G332400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
JAB/MPN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 219401656 | 219408306 | + | Tel3E01G332400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 41,623.88 Da | 54.18 | 83.69 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08969 | USP8 dimerisation domain | 12 | 106 | 1.0E-9 | IPR015063 |
| Gene3D | G3DSA:1.20.58.80 | - | 3 | 134 | 9.1E-26 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 322 | 372 | 3.5E-7 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G16144.1 | associated molecule with the SH3 domain of STAM 3. Encodes AMSH3, a deubiquitinating enzyme that hydrolyzes K48- and K63-linked ubiquitin chains in vitro. Required for intracellular trafficking and vacuole biogenesis. | 0 |
| RefSeq | XP_044356669.1 | AMSH-like ubiquitin thioesterase 3 isoform X2 [Triticum aestivum] | 0 |
| Q5PNU3 | AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana OX=3702 GN=AMSH3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A453ESR0 | USP8_dimer domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology