Basic Information
Locus ID:
Tel3E01G279700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 163134099 | 163140186 | - | Tel3E01G279700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 96,715.50 Da | 45.20 | 86.97 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 591 | 724 | 5.45849E-23 | - |
| Pfam | PF17862 | AAA+ lid domain | 747 | 789 | 8.2E-12 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 593 | 723 | 2.2E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 553 | 813 | 4.68E-61 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 552 | 833 | 7.0E-97 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 725 | 827 | 7.0E-97 | - |
| SMART | SM00382 | AAA_5 | 589 | 726 | 1.8E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 696 | 715 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 262 | - | - |
| Coils | Coil | Coil | 776 | 796 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_037404979.1 | uncharacterized protein LOC119267652 [Triticum dicoccoides] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A8R7THT3 | AAA domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology