Basic Information
Locus ID:
Tel3E01G220000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 113703695 | 113707984 | + | Tel3E01G220000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 70,605.26 Da | 50.69 | 67.47 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 381 | 510 | 1.78084E-62 | - |
| CDD | cd00201 | WW | 16 | 47 | 0.00585773 | IPR001202 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 394 | 501 | 5.4E-32 | IPR001650 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 187 | 356 | 2.0E-49 | IPR011545 |
| SUPERFAMILY | SSF51045 | WW domain | 7 | 48 | 2.07E-6 | IPR036020 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 233 | 517 | 1.35E-75 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 134 | 370 | 5.3E-86 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 371 | 542 | 4.8E-58 | IPR027417 |
| SMART | SM00456 | ww_5 | 14 | 47 | 6.4E-5 | IPR001202 |
| SMART | SM00490 | helicmild6 | 421 | 501 | 6.3E-33 | IPR001650 |
| SMART | SM00487 | ultradead3 | 181 | 384 | 2.1E-63 | IPR014001 |
| ProSiteProfiles | PS50020 | WW/rsp5/WWP domain profile. | 13 | 47 | 10.541301 | IPR001202 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 396 | 540 | 25.666222 | IPR001650 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 162 | 190 | 10.952771 | IPR014014 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 193 | 367 | 31.502712 | IPR014001 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 313 | 321 | - | IPR000629 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 101 | - | - |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01540.1 | DEAD box RNA helicase 1. RNA HELICASE DRH1 | 0 |
| RefSeq | XP_037404680.1 | DEAD-box ATP-dependent RNA helicase 14-like isoform X1 [Triticum dicoccoides] | 0 |
| Q5VQL1 | DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EEM2 | DEAD-box ATP-dependent RNA helicase 14 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology