Basic Information
Locus ID:
Tel3E01G216200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 110271594 | 110277480 | + | Tel3E01G216200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 163,399.41 Da | 35.37 | 104.55 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 314 | 601 | 1.30972E-91 | IPR044746 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1248 | 1468 | 4.93476E-123 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 931 | 1225 | 3.14045E-96 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 627 | 827 | 9.35484E-111 | - |
| Pfam | PF00005 | ABC transporter | 645 | 779 | 7.7E-20 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 1267 | 1415 | 1.3E-29 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 319 | 579 | 2.4E-21 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 933 | 1177 | 2.4E-33 | IPR011527 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 624 | 848 | 1.81E-55 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 303 | 611 | 6.02E-32 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1240 | 1480 | 3.95E-67 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 930 | 1232 | 3.92E-56 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 292 | 609 | 4.9E-47 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 894 | 1231 | 3.6E-65 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1233 | 1486 | 1.3E-79 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 612 | 860 | 2.9E-74 | IPR027417 |
| SMART | SM00382 | AAA_5 | 1276 | 1467 | 6.4E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 654 | 827 | 3.8E-11 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 627 | 850 | 22.609152 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 313 | 593 | 29.540152 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1250 | 1484 | 17.587168 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 933 | 1213 | 39.248699 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 752 | 766 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 882 | 905 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_037404667.1 | ABC transporter C family member 3-like [Triticum dicoccoides] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EEK4 | ABC transporter C family member 3 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology