HalophFGD

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Basic Information
Locus ID: Tel3E01G195500
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Protein of unknown function (DUF295)
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 95664284 95668455 - Tel3E01G195500
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.14 41,586.15 Da 45.11 80.17 -0.29
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 21 61 3.0E-6 IPR001810
Pfam PF03478 Protein of unknown function (DUF295) 274 321 2.4E-10 IPR005174
Gene3D G3DSA:1.20.1280.50 - 18 57 2.7E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044355699.1 F-box protein At2g05970-like [Triticum aestivum] 0
TrEMBL A0A453E7Q6 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_8712
Arecaceae Cocos nucifera 2 COCNU_05G007060, COCNU_05G007070
Nitrariaceae Nitraria sibirica 1 evm.TU.LG01.83
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_1AG0012460
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0237820.1
Poaceae Lolium multiflorum 7 gene-QYE76_050265, gene-QYE76_050266, gene-QYE76_050830 ...
gene-QYE76_056558, gene-QYE76_056560, gene-QYE76_056571, gene-QYE76_056573
Poaceae Oryza coarctata 2 Oco01G003610, Oco02G003630
Poaceae Oryza sativa 1 LOC_Os01g08830.1
Poaceae Paspalum vaginatum 1 gene-BS78_03G037800
Poaceae Puccinellia tenuiflora 2 Pt_Chr0200071, Pt_Chr0200105
Poaceae Sporobolus alterniflorus 3 Chr02G020390, Chr03G005950, Chr05G011270
Poaceae Thinopyrum elongatum 1 Tel3E01G195500
Poaceae Triticum dicoccoides 2 gene_TRIDC3AG014070, gene_TRIDC3BG018630
Poaceae Triticum aestivum 3 TraesCS3A02G113600.1, TraesCS3B02G133000.1 ...
TraesCS3D02G115900.1
Poaceae Zea mays 1 Zm00001eb122000_P002
Poaceae Zoysia japonica 1 nbis-gene-13251
Poaceae Zoysia macrostachya 2 Zma_g7756, Zma_g7757
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.