HalophFGD

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Basic Information
Locus ID: Tel3E01G139700
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Belongs to the enoyl-CoA hydratase isomerase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 65733822 65748047 + Tel3E01G139700
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.84 108,304.78 Da 31.11 91.38 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd06558 crotonase-like 6 162 2.12875E-42 -
Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 161 4.1E-23 IPR001753
Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 201 380 1.7E-47 IPR006176
Pfam PF00646 F-box domain 620 654 7.3E-6 IPR001810
Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 383 476 2.1E-13 IPR006108
SUPERFAMILY SSF81383 F-box domain 619 674 1.44E-8 IPR036047
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains 198 381 6.67E-44 IPR036291
SUPERFAMILY SSF48179 6-phosphogluconate dehydrogenase C-terminal domain-like 383 493 9.35E-18 IPR008927
SUPERFAMILY SSF50965 Galactose oxidase, central domain 692 989 6.93E-9 IPR011043
SUPERFAMILY SSF48179 6-phosphogluconate dehydrogenase C-terminal domain-like 511 594 1.79E-18 IPR008927
SUPERFAMILY SSF52096 ClpP/crotonase 3 161 3.53E-38 IPR029045
Gene3D G3DSA:3.90.226.10 - 1 162 9.3E-49 -
Gene3D G3DSA:1.10.1040.50 - 385 607 2.7E-58 -
Gene3D G3DSA:3.40.50.720 - 167 382 1.4E-52 -
SMART SM00256 fbox_2 621 661 1.0E-4 IPR001810
ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 380 404 - IPR006180
ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 94 114 - IPR018376
Coils Coil Coil 232 252 - -
Gene Ontology
Biological Process:
GO:0006631 (fatty acid metabolic process)
Molecular Function:
GO:0003824 (catalytic activity) GO:0005515 (protein binding) GO:0016491 (oxidoreductase activity) GO:0016616 (oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor) GO:0070403 (NAD+ binding)
KEGG Pathway
KO Term:
K10527 (enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211])
Pathway:
ko00071 (Fatty acid degradation) map00071 (Fatty acid degradation) ko00592 (alpha-Linolenic acid metabolism) map00592 (alpha-Linolenic acid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01212 (Fatty acid metabolism) map01212 (Fatty acid metabolism)
Module:
M00087 (beta-Oxidation) M00113 (Jasmonic acid biosynthesis)
Reaction:
R01975 ((S)-3-Hydroxybutanoyl-CoA + NAD+ <=> Acetoacetyl-CoA + NADH + H+) R03026 ((S)-3-Hydroxybutanoyl-CoA <=> Crotonoyl-CoA + H2O) R04170 ((S)-3-Hydroxydodecanoyl-CoA <=> 2-trans-Dodecenoyl-CoA + H2O) R04737 ((S)-3-Hydroxyhexadecanoyl-CoA + NAD+ <=> 3-Oxopalmitoyl-CoA + NADH + H+) R04738 ((S)-3-Hydroxyhexadecanoyl-CoA <=> trans-Hexadec-2-enoyl-CoA + H2O) R04739 ((S)-3-Hydroxytetradecanoyl-CoA + NAD+ <=> 3-Oxotetradecanoyl-CoA + NADH) R04740 ((S)-3-Hydroxytetradecanoyl-CoA <=> trans-Tetradec-2-enoyl-CoA + H2O) R04741 ((S)-3-Hydroxydodecanoyl-CoA + NAD+ <=> 3-Oxododecanoyl-CoA + NADH + H+) R04743 ((S)-Hydroxydecanoyl-CoA + NAD+ <=> 3-Oxodecanoyl-CoA + NADH + H+) R04744 ((S)-Hydroxydecanoyl-CoA <=> trans-Dec-2-enoyl-CoA + H2O) R04745 ((S)-3-Hydroxyoctanoyl-CoA + NAD+ <=> 3-Oxooctanoyl-CoA + NADH + H+) R04746 ((S)-3-Hydroxyoctanoyl-CoA <=> trans-Oct-2-enoyl-CoA + H2O) R04748 ((S)-Hydroxyhexanoyl-CoA + NAD+ <=> 3-Oxohexanoyl-CoA + NADH + H+) R04749 ((S)-Hydroxyhexanoyl-CoA <=> trans-Hex-2-enoyl-CoA + H2O) R07889 (3-Hydroxy-OPC8-CoA <=> trans-2-Enoyl-OPC8-CoA + H2O) R07890 (3-Hydroxy-OPC8-CoA + NAD+ <=> 3-Oxo-OPC8-CoA + NADH + H+) R07893 (3-Hydroxy-OPC6-CoA <=> trans-2-Enoyl-OPC6-CoA + H2O) R07894 (3-Hydroxy-OPC6-CoA + NAD+ <=> 3-Oxo-OPC6-CoA + NADH + H+) R07897 (3-Hydroxy-OPC4-CoA <=> trans-2-Enoyl-OPC4-CoA + H2O) R07898 (3-Hydroxy-OPC4-CoA + NAD+ <=> 3-Oxo-OPC4-CoA + NADH + H+)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G29010.1 Enoyl-CoA hydratase/isomerase family. Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities 0
RefSeq XP_047085149.1 peroxisomal fatty acid beta-oxidation multifunctional protein-like [Lolium rigidum] 0
Swiss-Prot Q8W1L6 Peroxisomal fatty acid beta-oxidation multifunctional protein OS=Oryza sativa subsp. japonica OX=39947 GN=MFP PE=1 SV=2 0
TrEMBL A0A8R7PN45 3-hydroxyacyl-CoA dehydrogenase OS=Triticum urartu OX=4572 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Anacardiaceae Pistacia vera 1 pistato.v30291420
Arecaceae Phoenix dactylifera 1 gene-LOC103701671
Brassicaceae Arabidopsis thaliana 1 AT2G41473.1
Plantaginaceae Plantago ovata 2 Pov_00037827, Pov_00038433
Poaceae Echinochloa crus-galli 48 AH01.2189, AH01.2195, AH03.3555, AH03.520, AH03.521 ...
AH03.534, AH03.621, AH03.771, AH03.772, AH03.774, AH03.778, AH04.2085, AH04.865, AH06.2538, AH07.2230, BH01.2859, BH03.614, BH03.641, BH03.687, BH03.899, BH03.903, BH04.831, BH04.832, BH04.833, BH05.3670, BH05.609, BH06.2338, BH06.2339, BH06.2340, BH07.2292, CH02.2815, CH03.1011, CH03.1012, CH03.1013, CH03.1016, CH03.4058, CH03.699, CH03.706, CH03.710, CH03.719, CH04.2492, CH04.839, CH05.708, CH06.2562, CH06.2563, CH06.2564, CH07.107, CH07.2367
Poaceae Eleusine coracana subsp. coracana 28 gene-QOZ80_2AG0108440, gene-QOZ80_2AG0132200 ...
gene-QOZ80_2AG0132210, gene-QOZ80_2BG0162070, gene-QOZ80_2BG0162080, gene-QOZ80_2BG0187660, gene-QOZ80_5AG0387550, gene-QOZ80_5AG0388340, gene-QOZ80_5AG0398950, gene-QOZ80_5BG0447660, gene-QOZ80_6AG0547090, gene-QOZ80_7AG0559540, gene-QOZ80_7AG0559690, gene-QOZ80_7AG0559710, gene-QOZ80_7AG0559930, gene-QOZ80_7AG0562450, gene-QOZ80_7AG0562470, gene-QOZ80_7AG0562480, gene-QOZ80_7BG0590880, gene-QOZ80_7BG0590920, gene-QOZ80_7BG0590940, gene-QOZ80_7BG0590980, gene-QOZ80_7BG0591120, gene-QOZ80_7BG0591160, gene-QOZ80_7BG0591210, gene-QOZ80_8AG0629740, gene-QOZ80_8BG0658620, gene-QOZ80_8BG0658660
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.3HG0234450.1, HORVU.MOREX.r3.3HG0246530.1 ...
HORVU.MOREX.r3.6HG0548950.1.CDS1, HORVU.MOREX.r3.6HG0548980.1.CDS1, HORVU.MOREX.r3.6HG0560200.1.CDS1, HORVU.MOREX.r3.6HG0567110.1, HORVU.MOREX.r3.6HG0567120.1.CDS1, HORVU.MOREX.r3.7HG0739630.1.CDS1, HORVU.MOREX.r3.7HG0739810.1.CDS1
Poaceae Lolium multiflorum 71 gene-QYE76_003164, gene-QYE76_003165, gene-QYE76_003228 ...
gene-QYE76_003229, gene-QYE76_005940, gene-QYE76_006449, gene-QYE76_007425, gene-QYE76_007426, gene-QYE76_007427, gene-QYE76_009917, gene-QYE76_009927, gene-QYE76_016247, gene-QYE76_018810, gene-QYE76_019790, gene-QYE76_019793, gene-QYE76_019795, gene-QYE76_019800, gene-QYE76_019809, gene-QYE76_019946, gene-QYE76_020019, gene-QYE76_024117, gene-QYE76_024384, gene-QYE76_026658, gene-QYE76_026823, gene-QYE76_030422, gene-QYE76_034567, gene-QYE76_036437, gene-QYE76_036439, gene-QYE76_036444, gene-QYE76_036446, gene-QYE76_036448, gene-QYE76_036449, gene-QYE76_036450, gene-QYE76_036452, gene-QYE76_036457, gene-QYE76_036458, gene-QYE76_037638, gene-QYE76_042937, gene-QYE76_046918, gene-QYE76_047312, gene-QYE76_048592, gene-QYE76_048596, gene-QYE76_049145, gene-QYE76_049286, gene-QYE76_049621, gene-QYE76_055065, gene-QYE76_055931, gene-QYE76_056377, gene-QYE76_057543, gene-QYE76_057544, gene-QYE76_059520, gene-QYE76_059840, gene-QYE76_060017, gene-QYE76_060018, gene-QYE76_060020, gene-QYE76_060365, gene-QYE76_060370, gene-QYE76_062142, gene-QYE76_062143, gene-QYE76_062144, gene-QYE76_062145, gene-QYE76_062171, gene-QYE76_062172, gene-QYE76_062173, gene-QYE76_062174, gene-QYE76_064526, gene-QYE76_067456, gene-QYE76_067457, gene-QYE76_067460, gene-QYE76_067461, gene-QYE76_069926
Poaceae Oryza coarctata 16 Oco01G012120, Oco13G003280, Oco13G003300, Oco13G003340 ...
Oco13G004400, Oco14G003120, Oco14G003130, Oco14G003580, Oco14G003600, Oco14G003610, Oco14G003630, Oco14G003650, Oco14G003680, Oco14G003720, Oco14G005030, Oco23G005920
Poaceae Oryza sativa 12 LOC_Os05g49530.1, LOC_Os07g08570.1, LOC_Os07g08850.1 ...
LOC_Os07g09710.1, LOC_Os07g09750.1, LOC_Os07g09814.2, LOC_Os07g09870.1, LOC_Os07g09880.1, LOC_Os07g09950.1, LOC_Os07g10710.1, LOC_Os07g13870.1, LOC_Os07g13890.1
Poaceae Paspalum vaginatum 14 gene-BS78_01G479600, gene-BS78_02G068700 ...
gene-BS78_02G068800, gene-BS78_02G069400, gene-BS78_02G069500, gene-BS78_02G069600, gene-BS78_02G071200, gene-BS78_02G115600, gene-BS78_02G115700, gene-BS78_03G143400, gene-BS78_04G146000, gene-BS78_05G105300, gene-BS78_05G105400, gene-BS78_10G214800
Poaceae Puccinellia tenuiflora 20 Pt_Chr0103507, Pt_Chr0103508, Pt_Chr0103509, Pt_Chr0103511 ...
Pt_Chr0202703, Pt_Chr0207151, Pt_Chr0303772, Pt_Chr0303775, Pt_Chr0303796, Pt_Chr0303804, Pt_Chr0400012, Pt_Chr0401397, Pt_Chr0401398, Pt_Chr0401399, Pt_Chr0401403, Pt_Chr0401413, Pt_Chr0401414, Pt_Chr0401416, Pt_Chr0401418, Pt_Chr0600836
Poaceae Sporobolus alterniflorus 16 Chr06G011030, Chr15G012580, Chr20G006450, Chr24G003140 ...
Chr24G003150, Chr24G003180, Chr24G003190, Chr24G003460, Chr24G004840, Chr26G001660, Chr28G002610, Chr28G002620, Chr28G002720, Chr28G004160, Chr28G005940, Chr29G006070
Poaceae Thinopyrum elongatum 14 Tel3E01G139700, Tel3E01G139900, Tel5E01G518300 ...
Tel5E01G519000, Tel5E01G519200, Tel5E01G519300, Tel5E01G828800, Tel6E01G160400, Tel6E01G163000, Tel6E01G273200, Tel6E01G295000, Tel6E01G295100, Tel7E01G754500, Tel7E01G842700
Poaceae Triticum dicoccoides 9 gene_TRIDC2AG077760, gene_TRIDC2BG075100 ...
gene_TRIDC3BG012920, gene_TRIDC3BG015590, gene_TRIDC3BG024110, gene_TRIDC5BG052180, gene_TRIDC6AG019220, gene_TRIDC6BG012510, gene_TRIDC6BG025200
Poaceae Triticum aestivum 49 TraesCS2B02G520400.1, TraesCS2D02G060700.1.cds1 ...
TraesCS2D02G492500.1, TraesCS2D02G520600.1.cds1, TraesCS2D02G556400.1.cds1, TraesCS3A02G096100.1.cds1, TraesCS3A02G135000.1, TraesCS3B02G091600.1.cds1, TraesCS3B02G111900.1.cds1, TraesCS3B02G168800.1, TraesCS3D02G079500.1.cds1, TraesCS3D02G096600.1.cds1, TraesCS3D02G151000.1, TraesCS5A02G326000.1.cds1, TraesCS5A02G326400.1.cds1, TraesCS5A02G326500.1.cds1, TraesCS5A02G326600.1.cds1, TraesCS5B02G326700.1.cds1, TraesCS5B02G326800.1.cds1, TraesCS5B02G326900.1.cds1, TraesCS5B02G327000.1.cds1, TraesCS5B02G327100.1.cds1, TraesCS5B02G534500.1.cds1, TraesCS5D02G332500.1.cds1, TraesCS5D02G332600.1.cds1, TraesCS5D02G332700.1.cds1, TraesCS5D02G332800.1.cds1, TraesCS5D02G332900.1.cds1, TraesCS5D02G333000.1.cds1, TraesCS6A02G066600.1.cds1, TraesCS6A02G140600.1, TraesCS6A02G140700.1, TraesCS6B02G089800.1.cds1, TraesCS6D02G065800.1.cds1, TraesCS6D02G066000.1.cds1, TraesCS6D02G128300.1, TraesCS6D02G130000.1, TraesCS6D02G130100.1, TraesCS7A02G492200.1, TraesCS7A02G493200.1.cds1, TraesCS7B02G397900.1.cds1, TraesCS7B02G398200.1.cds1, TraesCS7B02G399000.1.cds1, TraesCS7B02G399100.1.cds1, TraesCS7B02G399200.1.cds1, TraesCS7D02G478200.1.cds1, TraesCSU02G049800.1.cds1, TraesCSU02G076800.1.cds1, TraesCSU02G117500.1.cds1
Poaceae Zea mays 3 Zm00001eb325430_P001, Zm00001eb407470_P001 ...
Zm00001eb407480_P003
Poaceae Zoysia japonica 9 nbis-gene-26706, nbis-gene-26708, nbis-gene-26714 ...
nbis-gene-35574, nbis-gene-35576, nbis-gene-35580, nbis-gene-38811, nbis-gene-52763, nbis-gene-55664
Poaceae Zoysia macrostachya 8 Zma_g4874, Zma_g4879, Zma_g4880, Zma_g6151, Zma_g6152 ...
Zma_g6153, Zma_g6154, Zma_g6252
Solanaceae Lycium barbarum 2 gene-LOC132610451, gene-LOC132613453
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