Basic Information
Locus ID:
Tel3E01G113200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 52490308 | 52491378 | - | Tel3E01G113200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 38,873.74 Da | 30.62 | 89.38 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 36 | 161 | 3.37115E-25 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 194 | 291 | 5.8E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 195 | 293 | 1.14E-23 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 36 | 165 | 2.78E-28 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 185 | 292 | 5.3E-26 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 34 | 164 | 6.9E-24 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 293 | 356 | 3.7E-13 | - |
| SMART | SM00225 | BTB_4 | 195 | 294 | 2.8E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 195 | 258 | 17.148424 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 35 | 160 | 16.299822 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_037416456.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A077RVK1 | BTB domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF071300010CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G113200 |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G073300.1.cds1 |