Basic Information
Locus ID:
Tel3E01G112900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 52448779 | 52449894 | - | Tel3E01G112900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 40,482.51 Da | 40.15 | 80.51 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 36 | 158 | 1.59628E-24 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 185 | 304 | 4.0E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 173 | 305 | 6.28E-24 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 33 | 161 | 1.96E-29 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 34 | 160 | 1.3E-26 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 174 | 309 | 1.2E-25 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 310 | 370 | 1.4E-14 | - |
| SMART | SM00225 | BTB_4 | 191 | 308 | 5.1E-16 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 191 | 254 | 16.445236 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 35 | 157 | 17.297031 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_044336598.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FH10 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0016360.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 16 | gene-QYE76_009217, gene-QYE76_027558, gene-QYE76_035563 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500312, Pt_Chr0500313 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G151400, Tel2E01G837900, Tel3E01G112900 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG010120, gene_TRIDC1AG010130 ... |
| Poaceae | Triticum aestivum | 15 | TraesCS1A02G072400.1.cds1, TraesCS1A02G072900.1.cds1 ... |