Basic Information
Locus ID:
Tel3E01G055400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 22987462 | 22988514 | - | Tel3E01G055400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 38,839.99 Da | 41.91 | 75.29 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 45 | 340 | 1.0E-57 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 345 | 1.84E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 128 | 8.8E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 133 | 350 | 4.9E-57 | - |
| SMART | SM00220 | serkin_6 | 44 | 340 | 5.6E-77 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 340 | 43.537678 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 170 | 182 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 50 | 73 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044352708.1 | putative cyclin-dependent kinase F-2 [Triticum aestivum] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6GL88 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH05.3320, BH05.3342, CH05.3446 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0388610, gene-QOZ80_5BG0435650 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0084710.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_023515 |
| Poaceae | Oryza coarctata | 6 | Oco23G005350, Oco23G005420, Oco23G005910, Oco24G005190 ... |
| Poaceae | Oryza sativa | 4 | LOC_Os12g23940.1, LOC_Os12g23950.1, LOC_Os12g24140.1 ... |
| Poaceae | Thinopyrum elongatum | 7 | Tel1E01G627300, Tel3E01G055300, Tel3E01G055400 ... |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG047000, gene_TRIDC1AG055740 ... |
| Poaceae | Triticum aestivum | 12 | TraesCS1A02G315100.1.cds1, TraesCS1B02G327000.1.cds1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-21376, nbis-gene-40118 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g10509 |