Basic Information
Locus ID:
Tel3E01G023600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8608635 | 8609813 | + | Tel3E01G023600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 19,767.24 Da | 36.99 | 79.20 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00808 | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 1 | 56 | 1.3E-13 | IPR003958 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 77 | 138 | 3.3E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 165 | 2.52E-22 | IPR011009 |
| SUPERFAMILY | SSF47113 | Histone-fold | 1 | 81 | 1.23E-23 | IPR009072 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 76 | 170 | 1.5E-22 | - |
| Gene3D | G3DSA:1.10.20.10 | Histone, subunit A | 1 | 75 | 3.6E-25 | IPR009072 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 176 | 12.626622 | IPR000719 |
| PRINTS | PR00615 | CCAAT-binding transcription factor subunit A signature | 39 | 57 | 1.0E-11 | - |
| PRINTS | PR00615 | CCAAT-binding transcription factor subunit A signature | 19 | 37 | 1.0E-11 | - |
| PRINTS | PR00615 | CCAAT-binding transcription factor subunit A signature | 58 | 76 | 1.0E-11 | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37060.1 | nuclear factor Y, subunit B8. | 0 |
| RefSeq | XP_020164088.3 | putative proline-rich receptor-like protein kinase PERK6 [Aegilops tauschii subsp. strangulata] | 0 |
| Q60EQ4 | Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A452ZK19 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag6G02585 |
| Poaceae | Thinopyrum elongatum | 3 | Tel3E01G023600, Tel3E01G784400, Tel6E01G481700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7BG015980 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.43065.1 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14767 |