Basic Information
Locus ID:
Tel3E01G012900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 4638634 | 4641068 | + | Tel3E01G012900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 75,230.35 Da | 42.98 | 93.23 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 34 | 286 | 1.51667E-75 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 35 | 287 | 2.9E-52 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 370 | 647 | 3.0E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 650 | 4.59E-71 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 31 | 289 | 3.45E-56 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 31 | 290 | 1.3E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 447 | 5.1E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 658 | 9.7E-54 | - |
| SMART | SM00220 | serkin_6 | 369 | 654 | 2.2E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 659 | 36.357609 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 491 | 503 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 174 | 180 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 375 | 399 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_044343745.1 | L-type lectin-domain containing receptor kinase IX.1-like [Triticum aestivum] | 0 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 0 | |
| TrEMBL | N1QYP8 | Lectin-domain containing receptor kinase A4.2 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0228960 |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.3HG0219310.1, HORVU.MOREX.r3.3HG0231100.1 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G012900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG069590 |
| Poaceae | Triticum aestivum | 7 | TraesCS3A02G438300.1, TraesCS3B02G472200.1 ... |