Basic Information
Locus ID:
Tel3E01G012600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 4591591 | 4596313 | - | Tel3E01G012600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 82,157.77 Da | 42.51 | 82.63 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 310 | 340 | 2.67832E-7 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 35 | 98 | 5.8E-10 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 440 | 699 | 9.7E-44 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 310 | 352 | 2.8E-6 | IPR001881 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 433 | 714 | 1.15E-68 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 304 | 353 | 5.59E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 257 | 353 | 4.7E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 518 | 726 | 4.3E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 517 | 1.6E-25 | - |
| SMART | SM00220 | serkin_6 | 439 | 706 | 2.1E-35 | IPR000719 |
| SMART | SM00181 | egf_5 | 258 | 309 | 3.7 | IPR000742 |
| SMART | SM00179 | egfca_6 | 310 | 353 | 2.7E-7 | IPR001881 |
| SMART | SM00181 | egf_5 | 313 | 353 | 0.048 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 439 | 707 | 35.509567 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 310 | 353 | 13.103929 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 310 | 337 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 328 | 339 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 562 | 574 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_044352598.1 | wall-associated receptor kinase 2-like [Triticum aestivum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6GNP1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH09.693, BH09.711, CH09.770 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0320520, gene-QOZ80_4BG0357240 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0219240.1, HORVU.MOREX.r3.3HG0219270.1 |
| Poaceae | Oryza coarctata | 1 | Oco07G003480 |
| Poaceae | Oryza sativa | 15 | LOC_Os04g18590.1, LOC_Os04g20680.1, LOC_Os04g29770.1 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0200838 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr0G006600, Chr25G013120, Chr30G012830, Chr30G012870 |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G012600, Tel6E01G607000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC3AG002230, gene_TRIDC6AG051200 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS3A02G006900.1, TraesCS3D02G003900.1 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-44989, nbis-gene-49124, nbis-gene-56965 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g19503, Zma_g19505, Zma_g19511 |