Basic Information
Locus ID:
Tel2E01G985800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 704157485 | 704160902 | - | Tel2E01G985800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 53,588.48 Da | 36.95 | 95.56 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 171 | 451 | 1.2E-48 | IPR000719 |
| Pfam | PF00168 | C2 domain | 5 | 90 | 8.7E-12 | IPR000008 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 5 | 128 | 1.27E-18 | IPR035892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 152 | 454 | 1.35E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 138 | 246 | 2.0E-28 | - |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 1 | 126 | 1.0E-15 | IPR035892 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 264 | 467 | 7.4E-49 | - |
| SMART | SM00239 | C2_3c | 5 | 109 | 9.7E-9 | IPR000008 |
| SMART | SM00220 | serkin_6 | 170 | 454 | 3.0E-30 | IPR000719 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 1 | 107 | 13.738188 | IPR000008 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 170 | 460 | 36.371742 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 307 | 319 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 176 | 199 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23270.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 19. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_047085340.1 | uncharacterized protein LOC124696700 [Lolium rigidum] | 0 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B5ZP88 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB08g075440.2N |
| Poaceae | Echinochloa crus-galli | 6 | BH05.3487, BH05.3770, BH06.1905, BH06.1907, CH05.3630 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_4BG0355810 |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.2HG0214170.1, HORVU.MOREX.r3.2HG0214180.1 ... |
| Poaceae | Lolium multiflorum | 12 | gene-QYE76_008823, gene-QYE76_008829, gene-QYE76_008831 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_08G101700, gene-BS78_10G170000 ... |
| Poaceae | Puccinellia tenuiflora | 6 | Pt_Chr0106506, Pt_Chr0106736, Pt_Chr0300006, Pt_Chr0307037 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G070800, Tel2E01G985800, Tel3E01G183300 |
| Poaceae | Triticum dicoccoides | 12 | gene_TRIDC2AG004670, gene_TRIDC2AG079400 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS1D02G031300.1, TraesCS2A02G024200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb390200_P001 |