HalophFGD

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Basic Information
Locus ID: Tel2E01G982900
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Speckle-type POZ protein-like protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 701888233 701889121 + Tel2E01G982900
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.55 18,687.52 Da 31.60 102.68 0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00651 BTB/POZ domain 35 153 8.9E-19 IPR000210
SUPERFAMILY SSF54695 POZ domain 24 151 1.71E-24 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 9 164 2.2E-34 IPR011333
SMART SM00225 BTB_4 43 154 1.3E-12 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 43 110 14.645902 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19000.1 BTB-POZ and MATH domain 1. 0
RefSeq XP_047083734.1 BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] 0
Swiss-Prot Q8L765 BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 0
TrEMBL A0A3B6DPZ1 Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for Tel2E01G982900.

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