HalophFGD

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Basic Information
Locus ID: Tel2E01G979500
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Salt stress response/antifungal
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 700673269 700674076 + Tel2E01G979500
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.56 15,077.93 Da 25.00 79.16 0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF01657 Salt stress response/antifungal 37 130 1.1E-19 IPR002902
Gene3D G3DSA:3.30.430.20 - 31 133 1.0E-24 IPR038408
ProSiteProfiles PS51473 Gnk2-homologous domain profile. 31 133 17.882874 IPR002902
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044318072.1 cysteine-rich receptor-like protein kinase 10 [Triticum aestivum] 0
Swiss-Prot P0DO63 Antimicrobial ginkbilobin-2-like protein OS=Castanea crenata OX=103480 GN=GNK2L PE=2 SV=1 0
TrEMBL A0A3B6U3R7 Cysteine-rich receptor-like protein kinase 25 OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 BH05.601, CH01.3028, CH04.309
Poaceae Lolium multiflorum 6 gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ...
gene-QYE76_025756, gene-QYE76_059519, gene-QYE76_064527
Poaceae Oryza coarctata 1 Oco09G005110
Poaceae Oryza sativa 1 LOC_Os10g10540.1
Poaceae Paspalum vaginatum 2 gene-BS78_05G170900, gene-BS78_08G007300
Poaceae Puccinellia tenuiflora 5 Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ...
Pt_Chr0604614
Poaceae Sporobolus alterniflorus 2 Chr09G007730, Chr13G017140
Poaceae Thinopyrum elongatum 8 Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ...
Tel2E01G1016700, Tel2E01G1018600, Tel2E01G1019200, Tel2E01G979500, Tel7E01G055100
Poaceae Triticum aestivum 6 TraesCS2B02G628100.1, TraesCS2B02G628200.1 ...
TraesCS2B02G628300.1, TraesCS2D02G503300.1, TraesCS2D02G579600.1, TraesCSU02G036000.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.