HalophFGD

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Basic Information
Locus ID: Tel2E01G978200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: protein heterodimerization activity
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 700053923 700055353 - Tel2E01G978200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.24 53,451.36 Da 53.96 81.37 -0.36
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 17 58 2.88E-9 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K11252 (histone H2B)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044326976.1 uncharacterized protein LOC123047476 [Triticum aestivum] 0
TrEMBL A0A7H4LRF9 Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS5833 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.2HG0190990.1.CDS1
Poaceae Lolium multiflorum 2 gene-QYE76_057616, gene-QYE76_057617
Poaceae Puccinellia tenuiflora 6 Pt_Chr0301242, Pt_Chr0301243, Pt_Chr0301245, Pt_Chr0306809 ...
Pt_Chr0307080, Pt_Chr0307081
Poaceae Thinopyrum elongatum 1 Tel2E01G978200
Poaceae Triticum dicoccoides 1 gene_TRIDC2BG064650
Poaceae Triticum aestivum 10 TraesCS2A02G423000.1.cds1, TraesCS2B02G442200.1.cds1 ...
TraesCS2B02G442600.1.cds1, TraesCS2B02G601500.1.cds1, TraesCS2D02G420800.1.cds1, TraesCS2D02G594900.1, TraesCS3B02G483200.1.cds1, TraesCS3B02G483300.1.cds1, TraesCS3B02G483400.1.cds1, TraesCSU02G036200.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.