HalophFGD

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Basic Information
Locus ID: Tel2E01G971600
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 696349098 696351244 - Tel2E01G971600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.82 62,889.00 Da 40.77 77.99 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 288 307 - -
MobiDBLite mobidb-lite consensus disorder prediction 288 331 - -
KEGG Pathway
KO Term:
K10581 (ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24])
Pathway:
ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G16920.1 ubiquitin-conjugating enzyme 23. 0
RefSeq XP_020163401.1 probable ubiquitin-conjugating enzyme E2 23 [Aegilops tauschii subsp. strangulata] 0
Swiss-Prot Q9ZVX1 Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana OX=3702 GN=UBC23 PE=1 SV=1 0
TrEMBL A0A3B6CGR5 UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 1 CH05.3665
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.2HG0210000.1, HORVU.MOREX.r3.3HG0223690.1
Poaceae Lolium multiflorum 11 gene-QYE76_008216, gene-QYE76_026496, gene-QYE76_047469 ...
gene-QYE76_047471, gene-QYE76_047538, gene-QYE76_047539, gene-QYE76_047540, gene-QYE76_047547, gene-QYE76_047548, gene-QYE76_055707, gene-QYE76_061271
Poaceae Oryza sativa 1 LOC_Os05g06120.1
Poaceae Puccinellia tenuiflora 1 Pt_Chr0203400
Poaceae Thinopyrum elongatum 2 Tel2E01G971600, Tel3E01G051900
Poaceae Triticum aestivum 17 TraesCS2A02G403400.1, TraesCS2A02G586300.1 ...
TraesCS2B02G421500.1, TraesCS2B02G461900.1, TraesCS2B02G590300.1, TraesCS2B02G590500.1, TraesCS2B02G590700.1, TraesCS2B02G596800.1, TraesCS2D02G400600.1, TraesCS2D02G600300.1, TraesCS3A02G030400.1, TraesCS3A02G031600.1, TraesCS3B02G029000.1, TraesCS3B02G029100.1, TraesCS3D02G015200.1, TraesCS3D02G015300.1, TraesCS5B02G359000.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.