HalophFGD

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Basic Information
Locus ID: Tel2E01G943800
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 685203123 685203518 + Tel2E01G943800
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.17 14,570.74 Da 53.76 102.14 0.16
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 4 44 5.4E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 5 56 6.28E-9 IPR036047
ProSiteProfiles PS50181 F-box domain profile. 1 50 9.206031 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044321029.1 uncharacterized protein LOC123042694 isoform X2 [Triticum aestivum] 0
TrEMBL A0A3B5Y649 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Paspalum vaginatum 1 gene-BS78_02G308400
Poaceae Puccinellia tenuiflora 1 Pt_Chr0200951
Poaceae Thinopyrum elongatum 5 Tel2E01G943800, Tel6E01G100500, Tel6E01G100700 ...
Tel6E01G107200, Tel6E01G107400
Poaceae Triticum dicoccoides 1 gene_TRIDC6BG006680
Poaceae Zea mays 1 Zm00001eb238320_P001
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