Basic Information
Locus ID:
Tel2E01G896900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 668382717 | 668385315 | - | Tel2E01G896900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 68,960.25 Da | 48.66 | 84.97 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 184 | 418 | 8.3E-70 | IPR027356 |
| Pfam | PF03000 | NPH3 family | 443 | 470 | 2.8E-10 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 2 | 81 | 1.33E-6 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 183 | 494 | 78.581924 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 617 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 531 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 632 | - | - |
| Coils | Coil | Coil | 561 | 581 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_048553587.1 | BTB/POZ domain-containing protein At5g03250-like [Triticum urartu] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7H4LPS0 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS5242 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology