Basic Information
Locus ID:
Tel2E01G877200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
NTMC2T2.1
Description:
C2 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 659833757 | 659838275 | - | Tel2E01G877200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 64,071.31 Da | 32.33 | 95.02 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00030 | C2 | 264 | 366 | 2.58479E-27 | - |
| CDD | cd00030 | C2 | 443 | 543 | 6.71168E-25 | - |
| Pfam | PF17047 | Synaptotagmin-like mitochondrial-lipid-binding domain | 70 | 249 | 3.6E-13 | IPR039010 |
| Pfam | PF00168 | C2 domain | 441 | 543 | 1.5E-27 | IPR000008 |
| Pfam | PF00168 | C2 domain | 262 | 366 | 2.0E-23 | IPR000008 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 438 | 560 | 8.11E-35 | IPR035892 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 260 | 392 | 2.7E-31 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 258 | 399 | 6.3E-34 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 427 | 560 | 7.4E-38 | IPR035892 |
| SMART | SM00239 | C2_3c | 263 | 363 | 2.6E-23 | IPR000008 |
| SMART | SM00239 | C2_3c | 442 | 540 | 1.1E-24 | IPR000008 |
| ProSiteProfiles | PS51847 | Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. | 67 | 249 | 28.485199 | IPR031468 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 243 | 364 | 21.912245 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 423 | 541 | 21.983261 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 484 | 497 | 1.9E-7 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 458 | 470 | 1.9E-7 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 506 | 514 | 1.9E-7 | IPR000008 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05500.1 | Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells. | 0 |
| RefSeq | XP_044326560.1 | synaptotagmin-5-like [Triticum aestivum] | 0 |
| Q8L706 | Synaptotagmin-5 OS=Arabidopsis thaliana OX=3702 GN=SYT5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6CF15 | Synaptotagmin-5 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology