Basic Information
Locus ID:
Tel2E01G837900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 638389352 | 638390566 | + | Tel2E01G837900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 44,458.21 Da | 44.49 | 81.02 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 32 | 173 | 2.09997E-24 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 214 | 323 | 5.8E-20 | IPR000210 |
| Pfam | PF00917 | MATH domain | 52 | 172 | 4.6E-8 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 30 | 174 | 8.67E-31 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 196 | 322 | 2.98E-21 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 31 | 175 | 1.4E-31 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 203 | 321 | 1.7E-25 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 322 | 366 | 1.0E-13 | - |
| SMART | SM00225 | BTB_4 | 218 | 324 | 1.7E-14 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 218 | 286 | 14.749311 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 31 | 172 | 23.740547 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 0 |
| RefSeq | XP_044329008.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CE95 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0016360.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 16 | gene-QYE76_009217, gene-QYE76_027558, gene-QYE76_035563 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500312, Pt_Chr0500313 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G151400, Tel2E01G837900, Tel3E01G112900 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG010120, gene_TRIDC1AG010130 ... |
| Poaceae | Triticum aestivum | 15 | TraesCS1A02G072400.1.cds1, TraesCS1A02G072900.1.cds1 ... |