halophFGD

Basic Information

Locus ID: Tel2E01G831300

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	635445188	635446603	-	Tel2E01G831300

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.75	52,889.39 Da	58.03	96.24	-0.25

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF52047	RNI-like	161	370	3.85E-6	-
SUPERFAMILY	SSF81383	F-box domain	6	45	3.4E-7	IPR036047
ProSiteProfiles	PS50181	F-box domain profile.	7	43	9.576953	IPR001810
MobiDBLite	mobidb-lite	consensus disorder prediction	380	400	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G53840.1	F-box/RNI-like/FBD-like domains-containing protein.
RefSeq	XP_051197315.1	F-box/FBD/LRR-repeat protein At1g16930-like [Lolium perenne]
Swiss-Prot	Q9FGQ3	F-box/FBD/LRR-repeat protein At5g53840 OS=Arabidopsis thaliana OX=3702 GN=At5g53840 PE=2 SV=1
TrEMBL	A0A3B6CE01	F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	1	BH09.469
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_2AG0114340, gene-QOZ80_7AG0567720
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.2HG0106580.1.CDS1 ... HORVU.MOREX.r3.2HG0200490.1.CDS1, HORVU.MOREX.r3.2HG0200510.1.CDS1, HORVU.MOREX.r3.2HG0200580.1, HORVU.MOREX.r3.2HG0200650.1.CDS1
Poaceae	Lolium multiflorum	21	gene-QYE76_018842, gene-QYE76_019819, gene-QYE76_026969 ... gene-QYE76_038438, gene-QYE76_038444, gene-QYE76_038446, gene-QYE76_038447, gene-QYE76_038453, gene-QYE76_038461, gene-QYE76_038465, gene-QYE76_039892, gene-QYE76_039895, gene-QYE76_047132, gene-QYE76_047134, gene-QYE76_047141, gene-QYE76_047144, gene-QYE76_047146, gene-QYE76_047148, gene-QYE76_047149, gene-QYE76_047153, gene-QYE76_047157
Poaceae	Oryza sativa	2	LOC_Os04g19750.1, LOC_Os04g19800.1
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0300408, Pt_Chr0300410, Pt_Chr0300436, Pt_Chr0305599 ... Pt_Chr0402866
Poaceae	Sporobolus alterniflorus	1	Chr09G009210
Poaceae	Thinopyrum elongatum	5	Tel2E01G829000, Tel2E01G830300, Tel2E01G830500 ... Tel2E01G831300, Tel2E01G831600
Poaceae	Triticum dicoccoides	9	gene_TRIDC2AG008370, gene_TRIDC2AG068980 ... gene_TRIDC2AG069000, gene_TRIDC2AG069120, gene_TRIDC2BG074620, gene_TRIDC2BG074650, gene_TRIDC2BG074770, gene_TRIDC2BG074820, gene_TRIDC2BG074850
Poaceae	Triticum aestivum	9	TraesCS2A02G489900.1.cds1, TraesCS2B02G090000.1 ... TraesCS2B02G517000.1.cds1, TraesCS2B02G517200.1.cds1, TraesCS2B02G517800.1.cds1, TraesCS2B02G518100.1.cds1, TraesCS2D02G073800.1, TraesCS2D02G489600.1.cds1, TraesCSU02G014700.1